BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E12LP1|AL428928
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1403 1760 0.0
>3x_Contig1403
Length = 7711
Score = 1760 bits (887), Expect = 0.0
Identities = 897/900 (99%), Gaps = 2/900 (0%)
Strand = Plus / Minus
Query: 1 gatcccagctttgtctgaagctatgtgggatactaagaaggaagtcaagcaagctgctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1701 gatcccagctttgtctgaagctatgtgggatactaagaaggaagtcaagcaagctgctac 1642
Query: 61 cgctactatcaccaaggctactgaaaccgtcgaaaacaaggatattgaacgtttcattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1641 cgctactatcaccaaggctactgaaaccgtcgaaaacaaggatattgaacgtttcattcc 1582
Query: 121 aaagttgatcgaatgtatcgctgatccaagtgaagttccagaaaccgtccacttgttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1581 aaagttgatcgaatgtatcgctgatccaagtgaagttccagaaaccgtccacttgttggg 1522
Query: 181 tgccaccactttcgttgctgaagttaccccagctactttgtccatcatggttccattgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1521 tgccaccactttcgttgctgaagttaccccagctactttgtccatcatggttccattgtt 1462
Query: 241 gaacagaggtttggctgaaagagaaacttccatcaagcgtaaggctgctgttatcattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1461 gaacagaggtttggctgaaagagaaacttccatcaagcgtaaggctgctgttatcattga 1402
Query: 301 taacatgtgtaagttggtcgaag--ccacaagtcgttgctccattcttggaaaaattgtt 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1401 taacatgtgtaagttggtcgaagacccacaagtcgttgctccattcttggaaaaattgtt 1342
Query: 359 gccaggtttgaagaacaacttcgccaccattgctgacccagaagctcgtgaagttacttt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 gccaggtttgaagaacaacttcgccaccattgctgacccagaagctcgtgaagttacttt 1282
Query: 419 gagaggtttgaagaccttgagaagagtcggtaacgtcggtgccgacgatgtcttgccaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 gagaggtttgaagaccttgagaagagtcggtaacgtcggtgccgacgatgtcttgccaga 1222
Query: 479 agtttcccacgctggtgacattgctactaccagatccgttctagacgaattgttgaagga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 agtttcccacgctggtgacattgctactaccagatccgttctagacgaattgttgaagga 1162
Query: 539 ccaaaaggttgcttccagattcgacccagtcttgatctacattgctgccattgctgctga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 ccaaaaggttgcttccagattcgacccagtcttgatctacattgctgccattgctgctga 1102
Query: 599 tttgattgatgaaagaatcatcgatcaacaagcttggttcactcacatcactccttactt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 tttgattgatgaaagaatcatcgatcaacaagcttggttcactcacatcactccttactt 1042
Query: 659 cactatcttcgctcacgaaagaactgctaaggaaatcatcgacgaattcagaaagagagc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 cactatcttcgctcacgaaagaactgctaaggaaatcatcgacgaattcagaaagagagc 982
Query: 719 cgtcgacaacatcccagttggtccaaacttcgacgacgaagaagatgaaggtgaagactt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 cgtcgacaacatcccagttggtccaaacttcgacgacgaagaagatgaaggtgaagactt 922
Query: 779 gtgtwactgtgaattctccttggcttatggtgctaagatcttgttgaacaagactcaatt 838
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 gtgtaactgtgaattctccttggcttatggtgctaagatcttgttgaacaagactcaatt 862
Query: 839 gagattgaagagagctagaagatacggtttgtgtggtcctaacggtgctggtaagtctac 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gagattgaagagagctagaagatacggtttgtgtggtcctaacggtgctggtaagtctac 802
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6835
Number of Sequences: 1807
Number of extensions: 6835
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)